CNE This Week Spring 2007
- - Jan 22
  - Jan 29
  - Feb 5
  - Feb 12
  - Feb 19
  - Feb 26
  - March 5
  - March 12
  - March 19
  - March 26
  - April 2
  - April 9
  - April 16
  - April 23
  - April 30
  - May 7
  - May 14

CNE This Week Spring 2007

Week of	Major Events	Things Due	Full Schedule
Jan 15	classes start
Jan 22	Neurolucida Arrives		details
Jan 29			details
Feb 5			details
Feb 12		CNS Abstract due 02/09	details
Feb 19			details
Feb 26			details
March 5			details
March 12	Spring Break		details
March 19			details
March 26			details
April 2		IEEE-EMBS abstracts due 4/2	details
April 9			details
April 16			details
April 23		SIAM Registration	details
April 30			details
May 7			details
May 14			details

Note to users and editors: We cannot post copyrighted or private documents on this site. We only post publicly accessible links to published articles. Non-public document copies are only available from secure sites. If you want to participate in discussions and do not have access, feel free to email copy requests to Steve Schiff sjs49@engr.psu.edu or Bruce Gluckman bjg18@psu.edu.

Jan 22

Monday
- 9:00 am WAG Organizational Meeting
- 10:00 am WAG Journal Club: Giorgio presents Manns, et al, Neurobiol Learn Mem. 2007 Jan;87(1):9-20. Epub 2006 Jul 12, available here

Tuesday
- 9-5 Neurolucida Setup - Dr. Dan Perruzzi, MicroBrightfield
Wednesday
- 9:00 am CNE Journal Club (NOTE TIME): Discuss preprint available here . Note that this is a preprint and not to be distributed. Email Steve Schiff ssjs49@engr.psu.edu if you want a copy and do not have access.
- 11:00-3:00 Neurolucida Training
- 4:00 pm CNE Seminar, Eric Shea Brown,

“Spike-to-spike correlation and neural coding: basic roles for membrane and circuit dynamics.” 108 Wartik

Thursday
9-5 Neurolucida Training
Friday
Food Fight Canceled

Jan 29

Monday
- 9:00 am WAG Organizational Meeting
- 10:00 am WAG Journal Club: Jonathan presents Grumelli, et al, Neurotoxicology. 2005 Oct;26(5):761-7. Epub 2005 May 31., available here
Tuesday
- BMI will start next week.
Wednesday
- 10:00 am CNE Journal Club Will Meet: Bring New Papers less than 3 months old that you've read.
  list of coverage.
Thursday
Friday
- Food Fight Canceled

Feb 5

Monday
- 9:00 am WAG Organizational Meeting,
  Weinstein at PSU
- 10:00 am WAG Journal Club: Nick presents
  Nita, et al, Nonneuronal origin of CO2-related DC EEG shifts: an in vivo study in the cat. JNeurophysiol 2004 Aug;92(2):1011-22. here
Tuesday
- 3:30 BMI
  Introduction on Electroencephalography (EEG)
  Prepare pages 1-22 of Tutorial 1, The Electroencephalogram (EEG) (through Task 3)
  Tutorial notes (hard copy) available from Kamrun Nahar (Email: muk11@psu.edu)
Wednesday
- 10:00 am CNE Journal Club: Discuss
  Marshall, et al., Boosting slow oscillations during sleep potentiates memory.
  Nature. 2006 Nov 30;444(7119):610-3. available here
- 4:00 pm CNE Seminar, Henry Greenside, Songbirds and Synfire Chains, 108 Wartik
Thursday
- 4:00 Neuroscience Seminar, 108 Wartik,
  “Functional Genomics and Proteomics of Stem Cells”
  Dr. Kent Vrana, Elliot S. Vesell Professor and Chair of pharmacology, Penn State Milton S. Hershey Medical Center
Friday
- Food Fight Canceled

Feb 12

Monday
- 9:00 am WAG Organizational Meeting
- 9:30 Giorgio will present on his trip to White/Eichenbaum, read
  Hippocampal Neurons Encode Information about Different Types of Memory Episodes Occurring in the Same Location, Neuron 2000, reference
  Gradual translocation of spatial correlates of neuronal firing in the hippocampus toward prospective reward locations. Neuron 2006 reference
  as a backdrop
Tuesday
- 2:00 BMI (No BMI this week)
- 4:00 Life Sciences Colloquium:
  Charles F Stevens, Salk Institute, “How the brain is like, and not like, a computer”
  100 Berg Auditorium
Wednesday
- 10:00 am CNE Journal Club: Discuss XXX available here
- 4:00 pm CNE Seminar, Marom Bikson, 108 Wartik
Thursday
- 4:00 Neuroscience Seminar, 108 Wartik,
  “Brain States: Top-down Mechanisms in Visual Processing”
  Dr. Charles Gilbert, D. Arthur and Janet Ross Professor of Neurobiology, Rockefeller University
Friday
- Food Fight Canceled

Feb 19

Monday
- 9:00 am WAG Organizational Meeting
- 10:00 am WAG Journal Club: (Amzica paper delayed until 2/26)
  Sridhar will present on the statistics of circular data, especially relating to our seizure spike-entrainment data.
Tuesday
- 1:25 ESM seminar by Derek Warner
- 2:30 pm BMI seminar (Room 216 EESB)
  - We will read pages 7-30 (Task # 6 inclusive) of The Electroencephalogram: TUTORIAL 1. Tutorial notes (hard copy) available (if you still do not have a copy) from Kamrun Nahar (Email: muk11@psu.edu)

Wednesday
- Masha Stern from Microbrightfield will be here for additional training
- 10:00 am CNE Journal Club: Discuss XXX available here
- 4:00 pm CNE Seminar, Brian Litt, 108 Wartik
Thursday
- Masha Stern from Microbrightfield will be here for additional training
Friday
- Food Fight Canceled

Feb 26

Monday
- 9:00 am WAG Organizational Meeting
- 10:00 am WAG Journal Club: Jonathan presents Spatial buffering during slow and paroxysmal sleep oscillations in cortical networks of glial cells in vivo, Amzica et al, J. Neurosci 22, 1042, 2002, available here
Tuesday
- BMI
  - 2:00 pm, 216 EESB
  - We will read pages 31 to 46 of TUTORIAL 1 (to the end), The Electroencephalography.
  - Also, we will see some data from a trial experiment of EEG acquisition in order to understand artifacts.
  - In addition (meaning, if we have time), we will discuss a paper by Pfurtscheller on EEG desynchronization and synchronization. Ref.: Pfurtscheller G, Lopes da Silva FH. Event-related EEG/MEG synchronization and desynchronization: basic principles. Clin Neurophysiology 1999;110:1842-1857.

Wednesday
- 10:00 am CNE Journal Club: Discuss XXX available here
- 4:00 pm CNE Seminar, Jonathan Rubin, 108 Wartik
Thursday
Friday
- Food Fight Canceled

March 5

Monday
- 9:00 am WAG Organizational Meeting
- 10:00 am WAG Journal Club: Nick will present
  Oostendorph, et al, The conductivity of the human skull: results of in vivo and in vitro measurements, IEEE Trans Biomed Eng. 2000 Nov;47(11):1487-92, available here
Tuesday
- BMI (has been rescheduled to Wednesday, March 7 at 2:00 pm)
Wednesday
- 10:00 am CNE Journal Club: Bring New Stuff
- 2:00 pm Brain Machine Interface (BMI) seminar. Room 216 EES Building. Review article by Pfurtscheller on EEG desynchronization and synchronization. Ref.: Pfurtscheller G, Lopes da Silva FH. Event-related EEG/MEG synchronization and desynchronization: basic principles. Clin Neurophysiology 1999;110:1842-1857. In addition, some experimental EEG data (from our BMI Lab) will be discussed .

Thursday
Friday
- Food Fight Canceled

March 12

Spring Break Food Fight Canceled

Monday: Weinstein at PSU

March 19

Monday
- 9:00 am WAG Organizational Meeting
- 9:30 Giorgio will present on his trip to Buzsaki, read
  Differential synchronization of hippocampal networks during REM sleep versus active waking, reference
  Cannabinoids reveal importance of spike timing coordination in hippocampal function, Nat Neurosci 2006 reference
  as a backdrop
Tuesday
- BMI
  - Rescheduled
Wednesday
- 10:00 am CNE Journal Club: Discuss Frohlich, Bazhenov, Timofeev, Sejnowski, Maintenance and termination of neocortical oscillations by dynamic modulation of intrinsic and synaptic excitability, Thalamus and Related Systems, 1-10, 2007.
  Background information on this paper can be found in this and this paper.
- 4:00 pm CNE Seminar, Maxim Bazhenov, 108 Wartik
Thursday
- 4:00 Neuroscience Seminar, 108 Wartik,
  “State-dependent cAMP sensitivity of feed-forward inhibition of the hippocampal mossy fiber pathway”
  Dr. Chris McBain, Senior Investigator and Chief of the Laboratory of Cellular and Synaptic Neurophysiology
  National Institute of Child Health and Human Development
Friday
- Food Fight Canceled

March 26

Monday
- 9:00 am WAG Organizational Meeting
- 10:00 am WAG Journal Club: Giorgio will present on his trip to Buzsaki, read
  Differential synchronization of hippocampal networks during REM sleep versus active waking, reference
  Cannabinoids reveal importance of spike timing coordination in hippocampal function, Nat Neurosci 2006 reference
  as a backdrop
Tuesday
- BMI
  - 2:30 pm, Room 216 EES Building. Let's read pages 1-33 of Tutorial 2 (Brain Computer Interface). Please let Kamrun Nahar (muk11@psu.edu) know if you do not have a copy of Tutorial 2.
Wednesday
- 10:00 am CNE Journal Club: Bring New Stuff
Thursday
- 4:00 Neurosciece Seminar, 108 Wartik,
  Dr. Susan J. Birren, Professor, Department of Biology, National Center for Behavioral Genomics, Brandeis University
Friday
- Food Fight Canceled

April 2

Monday
- 9:00 am WAG Organizational Meeting (BJG out Mon & Tues).
- 10:00 am WAG Journal Club: High gamma power is phase-locked to theta oscillations in human neocortex. Science. 2006 Sep 15;313(5793):1626-8. here also if you are authenticated available here and here
Tuesday
- Brain Machine Interface (BMI)
  - 2:00-3:30 pm. Pages 29 to 48 of Tutorial 2 (Brain Computer Interface). Please contact Kamrun Nahar (muk11@psu.edu) if you do not have a copy of the tutorial.

Wednesday
- 10:00 am CNE Journal Club: Discuss XXX available here
- 4:00 pm CNE Seminar, Karen Moxon, 108 Wartik
Thursday
Friday
- Food Fight Canceled

April 9

Monday
- 9:00 am WAG Organizational Meeting
  Weinstein at PSU
- 10:00 am WAG Journal Club: Bruce will present some of the point statistics (spectral estimates) from Jarvis and Mitra, Sampling Properties of the Spectrum and Coherency of Sequences of Action Potentials, Neural Comp. 13, 717-49, 2001, available here

Tuesday
- BMI
Wednesday
- 10:00 am CNE Journal Club: we'll Discuss
  Wolpaw JR. Brain-computer interfaces as new brain output pathways. J Physiol 579:613-619, 2006. available here
- 4:00 pm CNE Seminar, Jonathan Wolpaw, 108 Wartik
Thursday
Friday
- Food Fight Canceled

April 16

Monday
- 9:00 am WAG Organizational Meeting
- 10:00 am WAG Journal Club: Richardson-Burns et al Electrochemical polymerization of conducting polymers in living neural tissue. J Neural Eng. 2007 Jun;4(2):L6-L13. link
Tuesday
- BMI, re-scheduled on Thursday
Wednesday
- 10:00 am CNE Journal Club, we'll discuss: Rune W Berg, Diane Whitmer and David Kleinfeld. Exploratory whisking by rat is not phase locked to the hippocampal theta rhythm. JNS 26(24): 6518-22, 2006. Available here
- 4:00 pm CNE Seminar, David Kleinfeld, 108 Wartik
Thursday
- Brain Machine Interface (BMI) seminar, 3:00 pm
  - We will discuss: Least-squares parameters estimation, Recursive least-squares estimation using different existing methods, and focus on Auto-regressive model structure which is a common model structure for time series signals such as EEG.

Friday
- Food Fight Canceled

April 23

Monday
- 9:00 am WAG Organizational Meeting
- 10:00 am WAG Journal Club: Bruce will continue to present some of the point statistics (spectral estimates) from Jarvis and Mitra, Sampling Properties of the Spectrum and Coherency of Sequences of Action Potentials, Neural Comp. 13, 717-49, 2001, available here
- 12:00 noon, 216 EESB, talk by Jun Yao: “The actin-dependent activation of presynaptic silent synapses contributes to long-term synaptic plasticity in developing hippocampal neurons”

Dr. Dan Peruzzi from MicroBrightField returns for the final 2 days of training on the Neurolucida system, Tuesday, Wednesday. He will be available to work with people all day on Tuesday and Wednesday. Please bring slides and images with you, and attend as much of this as you can, since there will be no further such opportunities in the lab!

Tuesday
- 9:00: Neurolucida introductory lecture
- BMI

Wednesday
Thursday (NOTE THE DAY)
- 10:00 am CNE Journal Club: Jiping He has offered to discuss his manuscript:
  Motor Cortical Activity in Response to Target Orientation Perturbations in a 3-D Reach-to-Grasp Task by Jing Fan, Jiping He. Copies are not to be distributed outside the discussion group. If you want to participate, please contact BruceGluckman@psu.edu for a copy.
- 4:00 pm CNE Seminar, Jiping He, 108 Wartik, “Motor Cortical Encoding of Planned Hand Orientation in a 3-D Reach-to-Grasp Task”
Friday
- Food Fight Canceled

April 30

Monday
- 9:00 am WAG Organizational Meeting
- 10:00 am WAG Journal Club: Jonathan presents , available

here

Tuesday
- BMI
Wednesday
- 10:00 am CNE Journal Club: Bring New Stuff
Thursday
- 4:00 Neuroscience Seminar,
  “Molecular control of CNS myelination” Dr. Yue Feng, MD, PhD, Associate Prof. of Pharmacology, Emory University, Atlanta GA
Friday
- Food Fight Canceled

May 7

Monday
- 9:00 am WAG Organizational Meeting
  Weinstein at PSU
- 10:00 am WAG Journal Club: Jonathan presents , available

here

Tuesday
- BMI
Wednesday
- 10:00 am CNE Journal Club: Bring New Stuff
Thursday
Friday
- Food Fight rescheduled from last week. Bring food

May 14

Monday
- 9:00 am WAG Organizational Meeting
- 10:00 am WAG Journal Club: Jonathan presents , available

here

Tuesday
- BMI
Wednesday
- 10:00 am CNE Journal Club: Bring New Stuff
Thursday
Friday
- Food Fight Canceled

Table of Contents

CNE This Week Spring 2007

Jan 22

Jan 29

Feb 5

Feb 12

Feb 19

Feb 26

March 5

March 12

March 19

March 26

April 2

April 9

April 16

April 23

April 30

May 7

May 14